Genetic structure of Populus hybrid zone along the Irtysh River provides insight into plastid-nuclear incompatibility.
Identifieur interne : 001863 ( Main/Exploration ); précédent : 001862; suivant : 001864Genetic structure of Populus hybrid zone along the Irtysh River provides insight into plastid-nuclear incompatibility.
Auteurs : Yan-Fei Zeng [République populaire de Chine] ; Jian-Guo Zhang [République populaire de Chine] ; Ai-Guo Duan [République populaire de Chine] ; Bawerjan Abuduhamiti [République populaire de Chine]Source :
- Scientific reports [ 2045-2322 ] ; 2016.
Descripteurs français
- KwdFr :
- MESH :
English descriptors
- KwdEn :
- MESH :
- genetics : Cell Nucleus, Plastids, Populus.
- Bayes Theorem, Genetic Linkage, Genetic Variation, Genetics, Population, Haplotypes, Rivers.
Abstract
In plants, the maintenance of species integrity despite hybridization has often been explained by the co-adaption of nuclear gene complexes. However, the interaction between plastid and nuclear sub-genomes has been underestimated. Here, we analyzed the genetic structure of a Populus alba and P. tremula hybrid zone along the Irtysh River system in the Altai region, northwest China, using both nuclear microsatellites and plastid DNA sequences. We found high interspecific differentiation, although the hybrid P. × canescens was prevalent. Bayesian inference classified most hybrids into F1, followed by a few back-crosses to P. alba, and fewer F2 hybrids and back-crosses to P. tremula, indicating a few introgressions but preference toward P. alba. When plastid haplotypes in parental species were distinct, P. × canescens carried the haplotypes of both parents, but showed significant linkage between intraspecific haplotype and nuclear genotypes at several microsatellite loci. Selection, rather than migration and assortative mating, might have contributed to such plastid-nuclear disequilibria. By removing later-generated hybrids carrying interspecific combinations of haplotype and nuclear genotypes, plastid-nuclear incompatibility has greatly limited the gene exchange between P. alba and P. tremula via backcrossing with hybrids, demonstrating a significant association between plastid haplotype and the proportion of nuclear admixture.
DOI: 10.1038/srep28043
PubMed: 27306416
PubMed Central: PMC4910079
Affiliations:
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xml:lang="en"><term>Bayes Theorem (MeSH)</term><term>Cell Nucleus (genetics)</term><term>Genetic Linkage (MeSH)</term><term>Genetic Variation (MeSH)</term><term>Genetics, Population (MeSH)</term><term>Haplotypes (MeSH)</term><term>Plastids (genetics)</term><term>Populus (genetics)</term><term>Rivers (MeSH)</term></keywords><keywords scheme="KwdFr" xml:lang="fr"><term>Génétique des populations (MeSH)</term><term>Haplotypes (MeSH)</term><term>Liaison génétique (MeSH)</term><term>Noyau de la cellule (génétique)</term><term>Plastes (génétique)</term><term>Populus (génétique)</term><term>Rivières (MeSH)</term><term>Théorème de Bayes (MeSH)</term><term>Variation génétique (MeSH)</term></keywords><keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Cell Nucleus</term><term>Plastids</term><term>Populus</term></keywords><keywords scheme="MESH" qualifier="génétique" xml:lang="fr"><term>Noyau de la cellule</term><term>Plastes</term><term>Populus</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Bayes Theorem</term><term>Genetic Linkage</term><term>Genetic Variation</term><term>Genetics, Population</term><term>Haplotypes</term><term>Rivers</term></keywords><keywords scheme="MESH" xml:lang="fr"><term>Génétique des populations</term><term>Haplotypes</term><term>Liaison génétique</term><term>Rivières</term><term>Théorème de Bayes</term><term>Variation génétique</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">In plants, the maintenance of species integrity despite hybridization has often been explained by the co-adaption of nuclear gene complexes. However, the interaction between plastid and nuclear sub-genomes has been underestimated. Here, we analyzed the genetic structure of a Populus alba and P. tremula hybrid zone along the Irtysh River system in the Altai region, northwest China, using both nuclear microsatellites and plastid DNA sequences. We found high interspecific differentiation, although the hybrid P. × canescens was prevalent. Bayesian inference classified most hybrids into F1, followed by a few back-crosses to P. alba, and fewer F2 hybrids and back-crosses to P. tremula, indicating a few introgressions but preference toward P. alba. When plastid haplotypes in parental species were distinct, P. × canescens carried the haplotypes of both parents, but showed significant linkage between intraspecific haplotype and nuclear genotypes at several microsatellite loci. Selection, rather than migration and assortative mating, might have contributed to such plastid-nuclear disequilibria. By removing later-generated hybrids carrying interspecific combinations of haplotype and nuclear genotypes, plastid-nuclear incompatibility has greatly limited the gene exchange between P. alba and P. tremula via backcrossing with hybrids, demonstrating a significant association between plastid haplotype and the proportion of nuclear admixture.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">27306416</PMID><DateCompleted><Year>2018</Year><Month>06</Month><Day>26</Day></DateCompleted><DateRevised><Year>2019</Year><Month>01</Month><Day>11</Day></DateRevised><Article PubModel="Electronic"><Journal><ISSN IssnType="Electronic">2045-2322</ISSN><JournalIssue CitedMedium="Internet"><Volume>6</Volume><PubDate><Year>2016</Year><Month>06</Month><Day>16</Day></PubDate></JournalIssue><Title>Scientific reports</Title><ISOAbbreviation>Sci Rep</ISOAbbreviation></Journal><ArticleTitle>Genetic structure of Populus hybrid zone along the Irtysh River provides insight into plastid-nuclear incompatibility.</ArticleTitle><Pagination><MedlinePgn>28043</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.1038/srep28043</ELocationID><Abstract><AbstractText>In plants, the maintenance of species integrity despite hybridization has often been explained by the co-adaption of nuclear gene complexes. However, the interaction between plastid and nuclear sub-genomes has been underestimated. Here, we analyzed the genetic structure of a Populus alba and P. tremula hybrid zone along the Irtysh River system in the Altai region, northwest China, using both nuclear microsatellites and plastid DNA sequences. We found high interspecific differentiation, although the hybrid P. × canescens was prevalent. Bayesian inference classified most hybrids into F1, followed by a few back-crosses to P. alba, and fewer F2 hybrids and back-crosses to P. tremula, indicating a few introgressions but preference toward P. alba. When plastid haplotypes in parental species were distinct, P. × canescens carried the haplotypes of both parents, but showed significant linkage between intraspecific haplotype and nuclear genotypes at several microsatellite loci. Selection, rather than migration and assortative mating, might have contributed to such plastid-nuclear disequilibria. By removing later-generated hybrids carrying interspecific combinations of haplotype and nuclear genotypes, plastid-nuclear incompatibility has greatly limited the gene exchange between P. alba and P. tremula via backcrossing with hybrids, demonstrating a significant association between plastid haplotype and the proportion of nuclear admixture.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Zeng</LastName><ForeName>Yan-Fei</ForeName><Initials>YF</Initials><AffiliationInfo><Affiliation>State Key Laboratory of Tree Genetics and Breeding, Key Laboratory of Tree Breeding and Cultivation, State Forestry Administration, Research Institute of Forestry, Chinese Academy of Forestry, Beijing, China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Zhang</LastName><ForeName>Jian-Guo</ForeName><Initials>JG</Initials><AffiliationInfo><Affiliation>State Key Laboratory of Tree Genetics and Breeding, Key Laboratory of Tree Breeding and Cultivation, State Forestry Administration, Research Institute of Forestry, Chinese Academy of Forestry, Beijing, China.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Collaborative Innovation Center of Sustainable Forestry in Southern China, Nanjing Forestry University, Nanjing, China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Duan</LastName><ForeName>Ai-Guo</ForeName><Initials>AG</Initials><AffiliationInfo><Affiliation>State Key Laboratory of Tree Genetics and Breeding, Key Laboratory of Tree Breeding and Cultivation, State Forestry Administration, Research Institute of Forestry, Chinese Academy of Forestry, Beijing, China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Abuduhamiti</LastName><ForeName>Bawerjan</ForeName><Initials>B</Initials><AffiliationInfo><Affiliation>Forest Research Institute of the Altai Region, Xinjiang, 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last="Abuduhamiti">Bawerjan Abuduhamiti</name><name sortKey="Duan, Ai Guo" sort="Duan, Ai Guo" uniqKey="Duan A" first="Ai-Guo" last="Duan">Ai-Guo Duan</name><name sortKey="Zhang, Jian Guo" sort="Zhang, Jian Guo" uniqKey="Zhang J" first="Jian-Guo" last="Zhang">Jian-Guo Zhang</name><name sortKey="Zhang, Jian Guo" sort="Zhang, Jian Guo" uniqKey="Zhang J" first="Jian-Guo" last="Zhang">Jian-Guo Zhang</name></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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